Publications

Publications2018-08-02T16:48:13+00:00

The maize W22 genome provides a foundation for functional genomics and transposon biology

Author : Nathan M. Springer, Sarah N. Anderson, Carson M. Andorf, Kevin R. Ahern, Fang Bai, Omer Barad, W. Brad Barbazuk, Hank W. Bass, Kobi Baruch, Gil Ben-Zvi, Edward S. Buckler, Robert Bukowski, Michael S. Campbell, Ethalinda K. S. Cannon, Paul Chomet, R. Kelly Dawe, Ruth Davenport, Hugo K. Dooner, Limei He Du, Chunguang Du, Katherine A. Easterling, Christine Gault, Jiahn-Chou Guan, Charles T. Hunter, Georg Jander, Yinping Jiao, Karen E. Koch, Guy Kol, Tobias G. Köllner, Toru Kudo, Qing Li, Fei Lu, Dustin Mayfield-Jones, Wenbin Mei, Donald R. McCarty, Jaclyn M. Noshay, John L. Portwood, Gil Ronen, A. Mark Settles, Doron Shem-Tov, Jinghua Shi, Ilya Soifer, Joshua C. Stein, Michelle C. Stitzer, Masaharu Suzuki, Daniel L. Vera, Erik Vollbrecht, Julia T. Vrebalov, Doreen Ware, Sharon Wei, Kokulapalan Wimalanathan, Margaret R. Woodhouse, Wenwei Xiong and Thomas P. Brutnel.

July, 2018|

New de novo assembly of the Atlantic bottlenose dolphin (Tursiops truncatus) improves genome completeness and provides haplotype phasing.

Author : Karine A Martinez-Viaud, Cindy Taylor Lawley, Milmer Martinez Vergara, Gil Ben-Zvi, Tammy Biniashvili, Kobi Baruch, Judy St. Leger, Jennie Le, Aparna Natarjan, Marlem Rivera, Narbie Gillergan, Erich Jaeger, Brian Steffy, Alexey Zimin

July, 2018|

Independent assessment and improvement of wheat genome sequence assemblies using Fosill jumping libraries

Author : Fu-Hao Lu, Neil McKenzie, George Kettleborough, Darren Heavens, Matthew D. Clark and Michael W. Bevan

May, 2018|

Deciphering genetic factors that determine melon fruit‐quality traits using RNA‐Seq‐based high‐resolution QTL and eQTL mapping

Author : Navot Galpaz, Itay Gonda, Doron Shem‐Tov, Omer Barad, Galil Tzuri Shery Lev, Zhangjun Fei , Yimin Xu, Linyong Mao, Chen Jiao, Rotem Harel‐Beja, Adi Doron‐Faigenboim, Oren Tzfadia , Einat Bar, Ayala Meir, Uzi Sa’ar, Aaron Fait , Eran Halperin, Merav Kenigswald, Elazar Fallik, Nadia Lombardi, Guy Kol, Gil Ronen, Yosef Burger, Amit Gur, Ya’akov Tadmor, Vitaly Portnoy, Arthur A. Schaffer, Efraim Lewinsohn, James J. Giovannoni, Nurit Katzir

 

January, 2018|

Contributions of Zea mays subspecies mexicana haplotypes to modern maize

Author : Ning Yang, Xi-Wen Xu, Rui-Ru Wang, Wen-Lei Peng, Lichun Cai, Jia-Ming Song, Wenqiang Li, , Xin Luo, Luyao Niu, Yuebin Wang, Min Jin, Lu Chen, Jingyun Luo, Min Deng, Long Wang, Qingchun Pan, Feng Liu, David Jackson, Xiaohong Yang, Ling-Ling Chen, Jianbing Yan

November, 2017|

Genome sequence of the progenitor of the wheat D genome Aegilops tauschii

Author : Ming-Cheng Luo, Yong Q. Gu, Daniela Puiu, Hao Wang, Sven O. Twardziok, Karin R. Deal, Naxin Huo, Tingting Zhu, Le Wang, Yi Wang, Patrick E. McGuire, Shuyang Liu, Hai Long, Ramesh K. Ramasamy, Juan C. Rodriguez, Sonny L. Van, Luxia Yuan, Zhenzhong Wang, Zhiqiang Xia, Lichan Xiao, Olin D. Anderson, Shuhong Ouyang, Yong Liang, Aleksey V. Zimin, Geo Pertea, Peng Qi, Jeffrey L. Bennetzen, Xiongtao Dai, Matthew W. Dawson, Hans-Georg Müller, Karl Kugler, Lorena Rivarola-Duarte, Manuel Spannagl, Klaus F. X. Mayer, Fu-Hao Lu, Michael W. Bevan, Philippe Leroy, Pingchuan Li, Frank M. You, Qixin Sun, Zhiyong Liu, Eric Lyons, Thomas Wicker, Steven L. Salzberg, Katrien M. Devos & Jan Dvořák

November, 2017|

Wild emmer genome architecture and diversity elucidate wheat evolution and domestication

Author : Raz Avni, Moran Nave, Omer Barad, Kobi Baruch, Sven O. Twardziok, Heidrun Gundlach, Iago Hale, Martin Mascher, Manuel Spannagl, Krystalee Wiebe, Katherine W. Jordan, Guy Golan, Jasline Deek, Batsheva Ben-Zvi, Gil Ben-Zvi, Axel Himmelbach, Ron P. MacLachlan, Andrew G. Sharpe, Allan Fritz, Roi Ben-David, Hikmet Budak, Tzion Fahima, Abraham Korol, Justin D. Faris, Alvaro Hernandez, Mark A. Mikel, Avraham A. Levy, Brian Steffenson, Marco Maccaferri, Roberto Tuberosa, Luigi Cattivelli, Primetta Faccioli, Aldo Ceriotti, Khalil Kashkush, Mohammad Pourkheirandish, Takao Komatsuda, Tamar Eilam, Hanan Sela, Amir Sharon, Nir Ohad, Daniel A. Chamovitz, Klaus F.X. Mayer, Nils Stein, Gil Ronen, Zvi Peleg, Curtis J. Pozniak, Eduard D. Akhunov, Assaf Distelfeld

July, 2017|

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize

Author : Candice Hirsch, Cory D Hirsch, Alex B Brohammer, Megan J Bowman, Ilya Soifer, Omer Barad, Doron Shem-Tov, Kobi Baruch, Fei Lu, Alvaro G Hernandez, Christopher J Fields, Chris L Wright, Klaus Koehler, Nathan M. Springer, Edward S. Buckler, C. Robin Buell, Natalia de Leon, Shawn M. Kaeppler, Kevin Childs, Mark A Mikel

October, 2016|